Pseudomonas denitrificans ATCC 13867, H681_22685

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas denitrificans ATCC 13867
GCF_000349845.1|latest
Locus Tag
H681_22685
Name
Replicon chromosome
Genomic location 5085471 - 5087468 (- strand)

Cross-References

RefSeq YP_007659944.1
GI 472327698
EC Number 2.2.1.1
Entrez 14998662
INSDC AGI26404.1
NCBI Locus Tag H681_22685
UniParc UPI0002C4EB5D
UniProtKB Acc M4X2U1
UniProtKB ID M4X2U1_PSEDE
UniRef100 UniRef100_M4X2U1
UniRef50 UniRef50_P22976
UniRef90 UniRef90_Q9I5Y8

Product

Feature Type CDS
Coding Frame 1
Product Name
transketolase
Synonyms
Evidence for Translation
Charge (pH 7) -21.58
Kyte-Doolittle Hydrophobicity Value -0.175
Molecular Weight (kDa) 71783.1
Isoelectric Point (pI) 5.01

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

PDB 3D Structures

Accession Header Accession Date Compound Source Resolution Method Percent Identity
4XEU TRANSFERASE 12/24/14 Crystal structure of a transketolase from Pseudomonas aeruginosa Pseudomonas aeruginosa 1.95 X-RAY DIFFRACTION 90.8

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 608 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000532 (535 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: H681_22685
Search term: transketolase

Human Homologs

References

No references are associated with this feature.