Pseudomonas denitrificans ATCC 13867, H681_24560
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Feature Overview
| Strain |
Pseudomonas denitrificans ATCC 13867
GCF_000349845.1|latest |
| Locus Tag |
H681_24560
|
| Name |
|
| Replicon | chromosome |
| Genomic location | 5508426 - 5509679 (+ strand) |
Cross-References
| RefSeq | YP_007660319.1 |
| GI | 472328073 |
| EC Number | 2.1.2.1 |
| Entrez | 14999037 |
| NCBI Locus Tag | H681_24560 |
Product
| Feature Type | CDS |
| Coding Frame | 1 |
| Product Name |
serine hydroxymethyltransferase
|
| Synonyms | |
| Evidence for Translation | |
| Charge (pH 7) | -6.99 |
| Kyte-Doolittle Hydrophobicity Value | -0.159 |
| Molecular Weight (kDa) | 44710.3 |
| Isoelectric Point (pI) | 6.05 |
Subcellular localization
| Individual Mappings | |
| Additional evidence for subcellular localization |
AlphaFold 2 Protein Structure Predictions
Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.
Pathogen Association Analysis
| Results |
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 654 genera
|
Orthologs/Comparative Genomics
| Pseudomonas Ortholog Database | View orthologs at Pseudomonas Ortholog Database |
| Pseudomonas Ortholog Group |
POG003094 (1150 members) |
| Putative Inparalogs | None Found |
Interactions
| STRING database | Search for predicted protein-protein interactions using:
Search term: H681_24560
Search term: serine hydroxymethyltransferase
|
Human Homologs
|
Ensembl
110, assembly
GRCh38.p14
|
serine hydroxymethyltransferase 2 [Source:HGNC Symbol;Acc:HGNC:10852]
E-value:
2.8e-96
Percent Identity:
46.9
|
|
Ensembl
110, assembly
GRCh38.p14
|
serine hydroxymethyltransferase 2 [Source:HGNC Symbol;Acc:HGNC:10852]
E-value:
2.8e-96
Percent Identity:
46.9
|
|
Ensembl
110, assembly
GRCh38.p14
|
serine hydroxymethyltransferase 2 [Source:HGNC Symbol;Acc:HGNC:10852]
E-value:
2.8e-96
Percent Identity:
46.9
|
|
Ensembl
110, assembly
GRCh38.p14
|
serine hydroxymethyltransferase 2 [Source:HGNC Symbol;Acc:HGNC:10852]
E-value:
2.8e-96
Percent Identity:
46.9
|
References
No references are associated with this feature.