Pseudomonas aeruginosa LESB58, PALES_04371

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas aeruginosa LESB58
GCF_000026645.1|latest
Locus Tag
PALES_04371
Name
Replicon chromosome
Genomic location 485821 - 487098 (- strand)

Cross-References

RefSeq YP_002438045
GI 218889181
Entrez 7179763

Product

Feature Type CDS
Coding Frame 1
Product Name
dihydropyrimidine dehydrogenase
Product Name Confidence: Class 3
Synonyms
Evidence for Translation
Charge (pH 7) -11.11
Kyte-Doolittle Hydrophobicity Value -0.083
Molecular Weight (kDa) 46206.2
Isoelectric Point (pI) 5.13

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 366 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000430 (922 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PALES_04371

Human Homologs

Ensembl 110, assembly GRCh38.p14
dihydropyrimidine dehydrogenase [Source:HGNC Symbol;Acc:HGNC:3012]
E-value: 4.2e-60
Percent Identity: 31.6

References

No references are associated with this feature.