Pseudomonas aeruginosa LESB58, PALES_06301 (trpC)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas aeruginosa LESB58
GCF_000026645.1|latest
Locus Tag
PALES_06301
Name
trpC
Replicon chromosome
Genomic location 682386 - 683222 (+ strand)

Cross-References

RefSeq YP_002438238
GI 218889374
Entrez 7181110

Product

Feature Type CDS
Coding Frame 1
Product Name
indole-3-glycerol-phosphate synthase
Product Name Confidence: Class 1
Synonyms
Evidence for Translation
Charge (pH 7) -11.35
Kyte-Doolittle Hydrophobicity Value 0.096
Molecular Weight (kDa) 30.3
Isoelectric Point (pI) 4.64

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

PDB 3D Structures

Accession Header Accession Date Compound Source Resolution Method Percent Identity
6Y88 LYASE 03/03/20 IGPS (Indole-3-glycerol phosphate synthase) from Pseudomonas aeruginosa in complex with substrate inhibitor rCdRP Pseudomonas aeruginosa 2.09983 X-RAY DIFFRACTION 99.6

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 584 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000631 (536 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PALES_06301
Search term: trpC

Human Homologs

References

No references are associated with this feature.