Pseudomonas aeruginosa LESB58, PALES_45881 (opdH)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas aeruginosa LESB58
GCF_000026645.1|latest
Locus Tag
PALES_45881
Name
opdH
Replicon chromosome
Genomic location 5043766 - 5045049 (+ strand)

Cross-References

RefSeq YP_002442171
GI 218893302
Entrez 7178575

Product

Feature Type CDS
Coding Frame 1
Product Name
cis-aconitate porin OpdH
Product Name Confidence: Class 1
Synonyms
Evidence for Translation
Charge (pH 7) 3.21
Kyte-Doolittle Hydrophobicity Value -0.457
Molecular Weight (kDa) 47.1
Isoelectric Point (pI) 8.96

Subcellular localization

Individual Mappings
Localization Confidence PMID
Outer Membrane Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

PDB 3D Structures

Accession Header Accession Date Compound Source Resolution Method Percent Identity
3T20 MEMBRANE PROTEIN 07/22/11 Crystal structure of Pseudomonas aeruginosa OccK5 (OpdH) Pseudomonas aeruginosa 2.6 X-RAY DIFFRACTION 99.7
2Y0L TRANSPORT PROTEIN 12/03/10 Crystal Structure of Pseudomonas Aeruginosa OpdO PSEUDOMONAS AERUGINOSA 2.59 X-RAY DIFFRACTION 99.5

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 21 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000729 (839 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PALES_45881
Search term: opdH

Human Homologs

References

No references are associated with this feature.