Pseudomonas aeruginosa LESB58, PALES_58811 (ampDh2)
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Feature Overview
| Strain |
Pseudomonas aeruginosa LESB58
GCF_000026645.1|latest |
| Locus Tag |
PALES_58811
|
| Name |
ampDh2
|
| Replicon | chromosome |
| Genomic location | 6512433 - 6513212 (- strand) |
Cross-References
| RefSeq | YP_002443458 |
| GI | 218894588 |
| Entrez | 7179466 |
Product
| Feature Type | CDS |
| Coding Frame | 1 |
| Product Name |
AmpDh2
|
| Synonyms | |
| Evidence for Translation | |
| Charge (pH 7) | 0.89 |
| Kyte-Doolittle Hydrophobicity Value | -0.296 |
| Molecular Weight (kDa) | 28.9 |
| Isoelectric Point (pI) | 7.29 |
Subcellular localization
| Individual Mappings | |
| Additional evidence for subcellular localization |
AlphaFold 2 Protein Structure Predictions
Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.
PDB 3D Structures
| Accession | Header | Accession Date | Compound | Source | Resolution | Method | Percent Identity |
| 4BPA | HYDROLASE | 05/23/13 | Crystal structure of AmpDh2 from Pseudomonas aeruginosa in complex with NAG-NAM-NAG-NAM tetrasaccharide | PSEUDOMONAS AERUGINOSA PAO1 | 2.7 | X-RAY DIFFRACTION | 100.0 |
| 4BJ4 | HYDROLASE | 04/16/13 | Structure of Pseudomonas aeruginosa amidase Ampdh2 | PSEUDOMONAS AERUGINOSA PAO1 | 1.722 | X-RAY DIFFRACTION | 100.0 |
| 4BOL | HYDROLASE | 05/21/13 | Crystal structure of AmpDh2 from Pseudomonas aeruginosa in complex with pentapeptide | PSEUDOMONAS AERUGINOSA PAO1 | 1.7 | X-RAY DIFFRACTION | 99.6 |
Pathogen Association Analysis
| Results |
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 249 genera
|
Orthologs/Comparative Genomics
| Pseudomonas Ortholog Database | View orthologs at Pseudomonas Ortholog Database |
| Pseudomonas Ortholog Group |
POG005025 (534 members) |
| Putative Inparalogs | None Found |
Interactions
| STRING database | Search for predicted protein-protein interactions using:
Search term: PALES_58811
Search term: ampDh2
Search term: AmpDh2
|
Human Homologs
References
No references are associated with this feature.