Pseudomonas aeruginosa PACS2, A0K_RS06650

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas aeruginosa PACS2
GCF_000168335.1|latest
Locus Tag
A0K_RS06650
Name
Replicon chromosome
Genomic location 1400957 - 1401538 (+ strand)

Cross-References

RefSeq ZP_01364141.1
GI 107100223
NCBI Locus Tag A0K_RS06650

Product

Feature Type CDS
Coding Frame 1
Product Name
RNA polymerase sigma factor AlgU
Synonyms
Evidence for Translation
Charge (pH 7) -4.83
Kyte-Doolittle Hydrophobicity Value -0.428
Molecular Weight (kDa) 22.2
Isoelectric Point (pI) 5.38

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

PDB 3D Structures

Accession Header Accession Date Compound Source Resolution Method Percent Identity
6IN7 TRANSCRIPTION 10/24/18 Crystal structure of AlgU in complex with MucA(cyto) Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1) 1.96 X-RAY DIFFRACTION 100.0

Pathogen Association Analysis

Results Analysis not done

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000736 (532 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: A0K_RS06650

Human Homologs

References

No references are associated with this feature.