Pseudomonas aeruginosa PACS2, A0K_RS08785
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Feature Overview
| Strain |
Pseudomonas aeruginosa PACS2
GCF_000168335.1|latest |
| Locus Tag |
A0K_RS08785
|
| Name |
|
| Replicon | chromosome |
| Genomic location | 1841097 - 1842293 (+ strand) |
Cross-References
| RefSeq | ZP_01364538.1 |
| GI | 107100620 |
| NCBI Locus Tag | A0K_RS08785 |
Product
| Feature Type | CDS |
| Coding Frame | 1 |
| Product Name |
lytic transglycosylase
|
| Synonyms | |
| Evidence for Translation | |
| Charge (pH 7) | 5.42 |
| Kyte-Doolittle Hydrophobicity Value | -0.176 |
| Molecular Weight (kDa) | 42.7 |
| Isoelectric Point (pI) | 9.27 |
Subcellular localization
| Individual Mappings | |
| Additional evidence for subcellular localization |
AlphaFold 2 Protein Structure Predictions
Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.
PDB 3D Structures
| Accession | Header | Accession Date | Compound | Source | Resolution | Method | Percent Identity |
| 7QVD | HYDROLASE | 01/21/22 | X-ray structure of the lytic transglycosylase SltB2 from Pseudomonas aeruginosa | Pseudomonas aeruginosa | 1.7 | X-RAY DIFFRACTION | 99.7 |
Pathogen Association Analysis
| Results | Analysis not done |
Orthologs/Comparative Genomics
| Pseudomonas Ortholog Database | View orthologs at Pseudomonas Ortholog Database |
| Pseudomonas Ortholog Group |
POG001129 (305 members) |
| Putative Inparalogs | None Found |
Interactions
| STRING database | Search for predicted protein-protein interactions using:
Search term: A0K_RS08785
Search term: lytic transglycosylase
|
Human Homologs
References
No references are associated with this feature.