| Internal ID | 1571912 | Source Database | CollecTF A cross-reference and link to the record at CollecTF is not available yet. (CollecTF website) |
| Feature Type | motif |
| Name |
DNR binding site
|
| Sequence |
TTGATTGCCATCAA Look for more occurrences |
| Start | 581944 |
| End | 581957 |
| Strand | + |
| Genomic Context | |
| Replicon | Pseudomonas aeruginosa PAO1 chromosome, complete genome. |
| Evidence |
ECO:0000314
direct assay evidence used in manual assertion
ChIP-Seq,ChIP-PCR,RNA-Seq,qPCR [quantitative real-time] [PMID:24157832] | ChIP-Seq,ChIP-PCR,RNA-Seq,qPCR [quantitative real-time]
|
| Additional Comments |
|
Deep sequencing analyses expands the Pseudomonas aeruginosa AmpR regulon to include small RNA-mediated regulation of iron acquisition, heat shock and oxidative stress response.
Balasubramanian D, Kumari H, Jaric M, Fernandez M, Turner KH, Dove SL, Narasimhan G, Lory S, Mathee K
Nucleic Acids Res 2014 Jan;42(2):979-98
PubMed ID: 24157832
|