Motif View

Internal ID 17655609
Source Database TransTermHP TERM 13
Feature Type terminator
Name
Rho-independent transcription terminator TERM 13
Sequence GGCTTGCCCCGGCAAGCC
Look for more occurrences
Start 21035
End 21052
Strand -
Genomic Context
Replicon Pseudomonas aeruginosa PAO1 chromosome, complete genome.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments TCGCTAAAAGAAAAA(5' tail) GGCTTGC(5' stem) CGGG(loop) GCAAGCC(3' stem) TTTGGGGGATGGGGT(3' tail). Confidence: 100. opp_overlap 21035

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685