Motif View

Internal ID 17655618
Source Database TransTermHP TERM 28
Feature Type terminator
Name
Rho-independent transcription terminator TERM 28
Sequence GGCATGGTCGGTAACGACCATGCC
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Start 147522
End 147545
Strand -
Genomic Context
Replicon Pseudomonas aeruginosa PAO1 chromosome, complete genome.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments CGGAAAAAGAAAAAA(5' tail) GGCATGGTCG(5' stem) TTAC(loop) CGACCATGCC(3' stem) TGTCGTCGTCAGCCT(3' tail). Confidence: 100. opp_overlap 147522

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685