Motif View

Internal ID 17655633
Source Database TransTermHP TERM 55
Feature Type terminator
Name
Rho-independent transcription terminator TERM 55
Sequence TCCGCCCTGCGGA
Look for more occurrences
Start 309152
End 309164
Strand -
Genomic Context
Replicon Pseudomonas aeruginosa PAO1 chromosome, complete genome.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments GGCGGCAAATCAAAA(5' tail) TCCGC(5' stem) AGG(loop) GCGGA(3' stem) TTCGAAAAAATGCGC(3' tail). Confidence: 91.

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685