Motif View

Internal ID 17655652
Source Database TransTermHP TERM 85
Feature Type terminator
Name
Rho-independent transcription terminator TERM 85
Sequence GGGCGGGCTGTCCGCCGGATGCGGGAAGCGTCCGGCAGGCAGCCCGCCC
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Start 424530
End 424578
Strand +
Genomic Context
Replicon Pseudomonas aeruginosa PAO1 chromosome, complete genome.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments GATACCGACTACCTG(5' tail) GGGCGGGCTGTCCGCCGGATGC(5' stem) GGGAA(loop) GCGTCCGGCAGGCAGCCCGCCC(3' stem) TTCTGTCTCTAGCAA(3' tail). Confidence: 100.

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685