Motif View

Internal ID 17655667
Source Database TransTermHP TERM 114
Feature Type terminator
Name
Rho-independent transcription terminator TERM 114
Sequence GCCGCCCCGAGGGGCGGC
Look for more occurrences
Start 542127
End 542144
Strand -
Genomic Context
Replicon Pseudomonas aeruginosa PAO1 chromosome, complete genome.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments CGAAGAAATGAAAAA(5' tail) GCCGCCC(5' stem) CTCG(loop) GGGCGGC(3' stem) TTTTCGTTGCGCTGC(3' tail). Confidence: 100. opp_overlap 542127

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685