Motif View

Internal ID 17655683
Source Database TransTermHP TERM 140
Feature Type terminator
Name
Rho-independent transcription terminator TERM 140
Sequence GGCGGATGACGCAAACGCCATCCGCC
Look for more occurrences
Start 672484
End 672509
Strand -
Genomic Context
Replicon Pseudomonas aeruginosa PAO1 chromosome, complete genome.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments GGCGGAAGAAAAGAA(5' tail) GGCGGATGGCG(5' stem) TTTG(loop) CGTCATCCGCC(3' stem) TTTTTTGTGCCCGGC(3' tail). Confidence: 100. opp_overlap 672484, overlap 672481

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685