Motif View

Internal ID 17655686
Source Database TransTermHP TERM 143
Feature Type terminator
Name
Rho-independent transcription terminator TERM 143
Sequence CCCCGCCTCGTGCGGGG
Look for more occurrences
Start 681353
End 681369
Strand +
Genomic Context
Replicon Pseudomonas aeruginosa PAO1 chromosome, complete genome.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments ATGTCACCCCCTGAA(5' tail) CCCCGC(5' stem) CTCGT(loop) GCGGGG(3' stem) TTTTTCATTAATGGA(3' tail). Confidence: 100.

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685