Motif View

Internal ID 17655694
Source Database TransTermHP TERM 155
Feature Type terminator
Name
Rho-independent transcription terminator TERM 155
Sequence GGCCGGTCGCAACCGGCC
Look for more occurrences
Start 705993
End 706010
Strand -
Genomic Context
Replicon Pseudomonas aeruginosa PAO1 chromosome, complete genome.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments GAACCCCATGAAAAA(5' tail) GGCCGGT(5' stem) TGCG(loop) ACCGGCC(3' stem) TTTTTCATGGGTGCT(3' tail). Confidence: 100. opp_overlap 705982 705978 705993

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685