Motif View

Internal ID 17655698
Source Database TransTermHP TERM 159
Feature Type terminator
Name
Rho-independent transcription terminator TERM 159
Sequence GCCCGCTTCGAGCGGGC
Look for more occurrences
Start 708501
End 708517
Strand +
Genomic Context
Replicon Pseudomonas aeruginosa PAO1 chromosome, complete genome.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments CACGAGGAAGAAAAA(5' tail) GCCCGCT(5' stem) TCG(loop) AGCGGGC(3' stem) TTTTTCATGCGTGCG(3' tail). Confidence: 100. opp_overlap 708501 708495

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685