Motif View

Internal ID 17655709
Source Database TransTermHP TERM 172
Feature Type terminator
Name
Rho-independent transcription terminator TERM 172
Sequence GACTGGCGCGCAGCGCCAGTC
Look for more occurrences
Start 774177
End 774197
Strand +
Genomic Context
Replicon Pseudomonas aeruginosa PAO1 chromosome, complete genome.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments GGGTCGAGGCGGAAA(5' tail) GACTGGCGC(5' stem) GCA(loop) GCGCCAGTC(3' stem) TTTCGCTGAGCCAAC(3' tail). Confidence: 100. opp_overlap 774177

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685