Motif View

Internal ID 17655736
Source Database TransTermHP TERM 210
Feature Type terminator
Name
Rho-independent transcription terminator TERM 210
Sequence GCCCGCCATTCGGCGGGC
Look for more occurrences
Start 908327
End 908344
Strand +
Genomic Context
Replicon Pseudomonas aeruginosa PAO1 chromosome, complete genome.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments GGCCTGGACGAAAAA(5' tail) GCCCGCC(5' stem) ATTC(loop) GGCGGGC(3' stem) TTTTTCATGGGCGCT(3' tail). Confidence: 100. opp_overlap 908327

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685