Motif View

Internal ID 17655757
Source Database TransTermHP TERM 243
Feature Type terminator
Name
Rho-independent transcription terminator TERM 243
Sequence GGGCCTGCATTGCTGCAGGCCC
Look for more occurrences
Start 991741
End 991762
Strand -
Genomic Context
Replicon Pseudomonas aeruginosa PAO1 chromosome, complete genome.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments TGCGCCATACCGAAA(5' tail) GGGCCTGCA(5' stem) GCAA(loop) TGCAGGCCC(3' stem) TTTTTCTTTGCCCGG(3' tail). Confidence: 90. opp_overlap 991741

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685