Internal ID | 17655762 | Source Database | TransTermHP TERM 248 |
Feature Type | terminator |
Name |
Rho-independent transcription terminator TERM 248
|
Sequence |
CGCTGCAAAAAAGCGCGCCCGATTGGGCGCGTTTTTTTGCGCG Look for more occurrences |
Start | 1001925 |
End | 1001967 |
Strand | + |
Genomic Context | |
Replicon | Pseudomonas aeruginosa PAO1 chromosome, complete genome. |
Evidence |
ECO:0000246
computational combinatorial evidence used in automatic assertion
|
Additional Comments | AGATCTGATCCGCTC(5' tail) CGCTGCAAAAAAGCGCGCCC(5' stem) GATT(loop) GGGCGCGTTTTTTTGC-GCG(3' stem) TTTCTCAGCGCCGTT(3' tail). Confidence: 100. gap 1, opp_overlap 1001937 1001938, overlap 1001938 |
Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685
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