Motif View

Internal ID 17655824
Source Database TransTermHP TERM 359
Feature Type terminator
Name
Rho-independent transcription terminator TERM 359
Sequence CCGACGCTCTGGCCTCCGCCTGCGGCGCTGGCCAGAGTCCCGG
Look for more occurrences
Start 1538926
End 1538968
Strand +
Genomic Context
Replicon Pseudomonas aeruginosa PAO1 chromosome, complete genome.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments CGCTGAGCCGGTTCC(5' tail) CCGACGCTCTGGCCTCCGCC(5' stem) TGC(loop) GGCGCTGGCCAGAGTCCCGG(3' stem) TTTTGGTCTATCGAT(3' tail). Confidence: 100.

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685