Motif View

Internal ID 17656639
Source Database TransTermHP TERM 90
Feature Type terminator
Name
Rho-independent transcription terminator TERM 90
Sequence GCCGGTCATCGACCGGC
Look for more occurrences
Start 417209
End 417225
Strand +
Genomic Context
Replicon Pseudomonas aeruginosa UCBPP-PA14 chromosome, complete genome.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments ACGGAATGAAAAAAA(5' tail) GCCGGTC(5' stem) ATC(loop) GACCGGC(3' stem) TTTTTGTTTTCTCGA(3' tail). Confidence: 100. opp_overlap 417209, overlap 417203

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685