Motif View

Internal ID 17656640
Source Database TransTermHP TERM 91
Feature Type terminator
Name
Rho-independent transcription terminator TERM 91
Sequence GCCGGTCATCGATCGGC
Look for more occurrences
Start 418528
End 418544
Strand +
Genomic Context
Replicon Pseudomonas aeruginosa UCBPP-PA14 chromosome, complete genome.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments GTCGAGGAGGACCCG(5' tail) GCCGGTC(5' stem) ATC(loop) GATCGGC(3' stem) TTTTTCTTGTTCAGG(3' tail). Confidence: 100.

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685