Motif View

Internal ID 17656659
Source Database TransTermHP TERM 121
Feature Type terminator
Name
Rho-independent transcription terminator TERM 121
Sequence GCCGCCCCGAGGGGCGGC
Look for more occurrences
Start 554915
End 554932
Strand -
Genomic Context
Replicon Pseudomonas aeruginosa UCBPP-PA14 chromosome, complete genome.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments CGAAGAAATGAGAAA(5' tail) GCCGCCC(5' stem) CTCG(loop) GGGCGGC(3' stem) TTTTCGTTGCGCTGC(3' tail). Confidence: 93. opp_overlap 554915

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685