Motif View

Internal ID 17656672
Source Database TransTermHP TERM 136
Feature Type terminator
Name
Rho-independent transcription terminator TERM 136
Sequence GCCCCGCCGAAGCGGGGC
Look for more occurrences
Start 613645
End 613662
Strand +
Genomic Context
Replicon Pseudomonas aeruginosa UCBPP-PA14 chromosome, complete genome.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments GCCGGAAACGAAAAA(5' tail) GCCCCGC(5' stem) CGAA(loop) GCGGGGC(3' stem) TTTTTCATCGCGCGG(3' tail). Confidence: 100. opp_overlap 613645 613639 613638

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685