Motif View

Internal ID 17657242
Source Database TransTermHP TERM 1059
Feature Type terminator
Name
Rho-independent transcription terminator TERM 1059
Sequence GGCCCGCCTTTTCGGCGGGCC
Look for more occurrences
Start 4658204
End 4658224
Strand -
Genomic Context
Replicon Pseudomonas aeruginosa UCBPP-PA14 chromosome, complete genome.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments TCCCGGAAATGCAAA(5' tail) GGCCCGCC(5' stem) GAAAA(loop) GGCGGGCC(3' stem) CGGAACGGCCGAAGC(3' tail). Confidence: 91. overlap 4658217 4658218

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685