Motif View

Internal ID 17657245
Source Database TransTermHP TERM 1062
Feature Type terminator
Name
Rho-independent transcription terminator TERM 1062
Sequence GGGCCTGCAGCAATGCAGGCCC
Look for more occurrences
Start 4659829
End 4659850
Strand -
Genomic Context
Replicon Pseudomonas aeruginosa UCBPP-PA14 chromosome, complete genome.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments CGGGCAAAAAAAAAG(5' tail) GGGCCTGCA(5' stem) TTGC(loop) TGCAGGCCC(3' stem) TTTCGGTATGGCGCA(3' tail). Confidence: 100. opp_overlap 4659829, overlap 4659828

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685