Motif View

Internal ID 17657257
Source Database TransTermHP TERM 1075
Feature Type terminator
Name
Rho-independent transcription terminator TERM 1075
Sequence GCGCCAGGCTGTCGCCTGGCGG
Look for more occurrences
Start 4711758
End 4711779
Strand -
Genomic Context
Replicon Pseudomonas aeruginosa UCBPP-PA14 chromosome, complete genome.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments AATATACGAGAAAAA(5' tail) CCGCCAGGC(5' stem) GACA(loop) GCCTGGCGC(3' stem) CTCACATCTGTTGCA(3' tail). Confidence: 100. overlap 4711759

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685