Motif View

Internal ID 17657288
Source Database TransTermHP TERM 1131
Feature Type terminator
Name
Rho-independent transcription terminator TERM 1131
Sequence GGCCCTCCCCACGGAGGGCC
Look for more occurrences
Start 4917849
End 4917868
Strand -
Genomic Context
Replicon Pseudomonas aeruginosa UCBPP-PA14 chromosome, complete genome.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments GTTCGCCGAAAAAAA(5' tail) GGCCCTCC(5' stem) GTGG(loop) GGAGGGCC(3' stem) TGGCGGGTATCGTGC(3' tail). Confidence: 100. opp_overlap 4917854

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685