Motif View

Internal ID 17657290
Source Database TransTermHP TERM 1134
Feature Type terminator
Name
Rho-independent transcription terminator TERM 1134
Sequence CCCCTGGTCATCGCTGACCAGGGG
Look for more occurrences
Start 4951991
End 4952014
Strand +
Genomic Context
Replicon Pseudomonas aeruginosa UCBPP-PA14 chromosome, complete genome.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments CGCGCAAAAGCAAAA(5' tail) CCCCTGGTCA(5' stem) TCGC(loop) TGACCAGGGG(3' stem) TTTTGGGATAGGAGC(3' tail). Confidence: 100. opp_overlap 4951986 4951985 4951991

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685