Pseudomonas aeruginosa PAO1, PA0037 (trpI)

Gene Ontology

Ontology	Accession	Term	GO Evidence	Evidence Ontology (ECO) Code	Reference	Comments
Biological Process	GO:0006355	regulation of transcription, DNA-templated	IDA Inferred from Direct Assay	ECO:0000314 direct assay evidence used in manual assertion	1904858	Reviewed by curator
Biological Process	GO:2000284	positive regulation of cellular amino acid biosynthetic process	IMP Inferred from Mutant Phenotype	ECO:0000015 mutant phenotype evidence	1904858	Reviewed by curator
Molecular Function	GO:0003700	DNA-binding transcription factor activity	ISM Inferred from Sequence Model Term mapped from: InterPro:PR00039	ECO:0000259 match to InterPro signature evidence used in automatic assertion
Biological Process	GO:0006355	regulation of transcription, DNA-templated	ISM Inferred from Sequence Model Term mapped from: InterPro:PR00039	ECO:0000259 match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Amino acid biosynthesis and metabolism Other PAO1 genes in this class Transcriptional regulators Other PAO1 genes in this class

Functional Predictions from Interpro

Analysis	Accession	Description	Interpro Accession	Interpro Description	Amino Acid Start	Amino Acid Stop	E-value
CDD	cd08482	PBP2_TrpI	IPR037418	HTH-type transcriptional regulator TrpI, PBP2	95	289	3.73362E-104
Gene3D	G3DSA:1.10.10.10	-	IPR036388	Winged helix-like DNA-binding domain superfamily	7	93	1.7E-20
FunFam	G3DSA:3.40.190.10:FF:000017	Glycine cleavage system transcriptional activator	-	-	165	264	3.3E-31
FunFam	G3DSA:1.10.10.10:FF:000038	Glycine cleavage system transcriptional activator	-	-	5	89	3.1E-28
SUPERFAMILY	SSF46785	Winged helix DNA-binding domain	IPR036390	Winged helix DNA-binding domain superfamily	4	87	2.72E-20
PANTHER	PTHR30537	HTH-TYPE TRANSCRIPTIONAL REGULATOR	-	-	8	293	2.7E-61
Pfam	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family	IPR000847	Transcription regulator HTH, LysR	8	66	3.2E-18
Pfam	PF03466	LysR substrate binding domain	IPR005119	LysR, substrate-binding	96	293	1.5E-20
Gene3D	G3DSA:3.40.190.10	-	-	-	165	264	1.6E-34
PRINTS	PR00039	LysR bacterial regulatory protein HTH signature	IPR000847	Transcription regulator HTH, LysR	44	55	6.4E-6
Coils	Coil	Coil	-	-	113	133	-
PRINTS	PR00039	LysR bacterial regulatory protein HTH signature	IPR000847	Transcription regulator HTH, LysR	34	44	6.4E-6
PRINTS	PR00039	LysR bacterial regulatory protein HTH signature	IPR000847	Transcription regulator HTH, LysR	23	34	6.4E-6
Gene3D	G3DSA:3.40.190.10	-	-	-	99	289	1.6E-34
SUPERFAMILY	SSF53850	Periplasmic binding protein-like II	-	-	95	294	2.71E-26

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.