Pseudomonas aeruginosa PAO1, PA0084 (tssC1)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse PseudoCyc / Metabolic Pathways

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments

Functional Classifications Manually Assigned by PseudoCAP

Protein secretion/export apparatus Other PAO1 genes in this class

Pathways

Database Xref Pathway Version Evidence PMID
PseudoCAP Hcp secretion island I (HSI-I) type VI secretion system ECO:0000037
not_recorded
KEGG pae02025 Biofilm formation - Pseudomonas aeruginosa 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
PANTHER PTHR35565 CYTOPLASMIC PROTEIN-RELATED IPR010269 Type VI secretion system TssC-like 6 497 0.0
Pfam PF05943 EvpB/VC_A0108, tail sheath N-terminal domain IPR044031 TssC1, N-terminal 69 371 0.0
NCBIfam TIGR03355 JCVI: type VI secretion system contractile sheath large subunit IPR010269 Type VI secretion system TssC-like 19 493 0.0
Pfam PF18945 EvpB/VC_A0108, tail sheath gpW/gp25-like domain IPR044032 TssC1, C-terminal 381 492 2.9E-43

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.