Pseudomonas aeruginosa PAO1, PA0087 (tssE1)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse PseudoCyc / Metabolic Pathways

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments

Functional Classifications Manually Assigned by PseudoCAP

Protein secretion/export apparatus Other PAO1 genes in this class

Pathways

Database Xref Pathway Version Evidence PMID
PseudoCAP Hcp secretion island I (HSI-I) type VI secretion system ECO:0000037
not_recorded

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
PANTHER PTHR38595 CYTOPLASMIC PROTEIN-RELATED - - 1 161 1.0E-54
SUPERFAMILY SSF160719 gpW/gp25-like - - 39 152 1.44E-9
Pfam PF04965 Baseplate wedge protein gp25 IPR007048 IraD/Gp25-like 39 141 1.2E-21
NCBIfam TIGR03357 JCVI: type VI secretion system baseplate subunit TssE IPR017737 Type VI secretion system protein TssE1-like 11 161 4.5E-27

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.