Pseudomonas aeruginosa PAO1, PA0128

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse PseudoCyc / Metabolic Pathways

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments

Functional Classifications Manually Assigned by PseudoCAP

Hypothetical, unclassified, unknown Other PAO1 genes in this class

Pathways

Database Xref Pathway Version Evidence PMID
KEGG pae01120 Microbial metabolism in diverse environments 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Gene3D G3DSA:2.30.30.40 SH3 Domains - - 43 113 1.6E-36
NCBIfam TIGR00686 JCVI: zinc ribbon domain-containing protein YjdM IPR004624 Protein YjdM 4 112 8.7E-50
SUPERFAMILY SSF82057 Prokaryotic SH3-related domain - - 41 113 9.16E-29
FunFam G3DSA:2.20.25.10:FF:000003 Alkylphosphonate utilization protein PhnA - - 1 42 1.1E-23
Gene3D G3DSA:2.20.25.10 - - - 1 42 7.1E-23
SUPERFAMILY SSF57783 Zinc beta-ribbon - - 3 37 2.13E-15
Pfam PF08274 PhnA Zinc-Ribbon IPR013987 Protein YjdM, N-terminal 3 32 4.0E-17
Pfam PF03831 PhnA domain IPR013988 Protein YjdM, C-terminal 46 113 6.9E-33
FunFam G3DSA:2.30.30.40:FF:000013 Alkylphosphonate utilization protein PhnA - - 44 113 1.5E-40
PANTHER PTHR30305 UNCHARACTERIZED - - 8 112 3.7E-17

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.