Pseudomonas aeruginosa PAO1, PA0129 (bauD)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse PseudoCyc / Metabolic Pathways

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Biological Process GO:0019483 beta-alanine biosynthetic process
IDA
Inferred from Direct Assay
ECO:0000314
direct assay evidence used in manual assertion
21622750 Reviewed by curator
Cellular Component GO:0016020 membrane
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF00324
ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0055085 transmembrane transport
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF00324
ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0015185 gamma-aminobutyric acid transmembrane transporter activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR01773
ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0015812 gamma-aminobutyric acid transport
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR01773
ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Carbon compound catabolism Other PAO1 genes in this class
Transport of small molecules Other PAO1 genes in this class

Pathways

Database Xref Pathway Version Evidence PMID
PseudoCAP Beta-alanine catabolism ECO:0000037
not_recorded

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Gene3D G3DSA:1.20.1740.10 Amino acid/polyamine transporter I - - 21 465 1.0E-86
NCBIfam TIGR01773 JCVI: GABA permease IPR011265 GABA permease 1 461 0.0
FunFam G3DSA:1.20.1740.10:FF:000001 Amino acid permease - - 17 464 0.0
Pfam PF00324 Amino acid permease IPR004841 Amino acid permease/ SLC12A domain 26 449 2.5E-117
PIRSF PIRSF006060 AA_transporter - - 8 472 9.6E-74
PANTHER PTHR43495 GABA PERMEASE - - 11 462 0.0

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.