Pseudomonas aeruginosa PAO1, PA0151

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse PseudoCyc / Metabolic Pathways

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Biological Process GO:0007166 cell surface receptor signaling pathway
NAS
Non-traceable Author Statement 		ECO:0000303
non-traceable author statement used in manual assertion		 18086184 Reviewed by curator
Cellular Component GO:0019867 outer membrane
IDA
Inferred from Direct Assay 		ECO:0000314
direct assay evidence used in manual assertion		 18086184 Reviewed by curator
Molecular Function GO:0038023 signaling receptor activity
ISS
Inferred from Sequence or Structural Similarity 		ECO:0000250
sequence similarity evidence used in manual assertion		 18086184 Reviewed by curator
Molecular Function GO:0015343 siderophore transmembrane transporter activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR01783
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0038023 signaling receptor activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR01783
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0015891 siderophore transport
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR01783
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Cellular Component GO:0009279 cell outer membrane
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR01783
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Cellular Component GO:0019867 outer membrane
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SM00965
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Transport of small molecules Other PAO1 genes in this class

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Pfam PF07715 TonB-dependent Receptor Plug Domain IPR012910 TonB-dependent receptor, plug domain 145 242 4.5E-16
Gene3D G3DSA:3.55.50.30 - - - 26 125 1.2E-21
FunFam G3DSA:2.40.170.20:FF:000005 TonB-dependent siderophore receptor - - 261 795 0.0
CDD cd01347 ligand_gated_channel - - 151 795 6.86379E-90
FunFam G3DSA:2.170.130.10:FF:000010 Ferripyoverdine receptor - - 123 249 8.5E-36
PANTHER PTHR32552 FERRICHROME IRON RECEPTOR-RELATED IPR039426 TonB-dependent receptor-like 116 795 0.0
SUPERFAMILY SSF56935 Porins - - 112 795 2.9E-124
Pfam PF00593 TonB dependent receptor IPR000531 TonB-dependent receptor-like, beta-barrel 317 793 1.4E-68
SMART SM00965 STN_2 IPR011662 Secretin/TonB, short N-terminal domain 56 107 1.1E-8
Gene3D G3DSA:2.170.130.10 - IPR037066 TonB-dependent receptor, plug domain superfamily 129 252 5.6E-25
Gene3D G3DSA:2.40.170.20 - IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily 260 795 2.5E-111
NCBIfam TIGR01783 JCVI: TonB-dependent siderophore receptor IPR010105 TonB-dependent siderophore receptor 146 795 1.9E-107

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.