Pseudomonas aeruginosa PAO1, PA0225 (erfA)

Gene Ontology

Ontology	Accession	Term	GO Evidence	Evidence Ontology (ECO) Code	Reference	Comments
Molecular Function	GO:0043565	sequence-specific DNA binding	IDA Inferred from Direct Assay	ECO:0000096 electrophoretic mobility shift assay evidence	31925438	Reviewed by curator
Molecular Function	GO:0003677	DNA binding	ISM Inferred from Sequence Model Term mapped from: InterPro:G3DSA:1.10.260.40	ECO:0000259 match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Transcriptional regulators Other PAO1 genes in this class

Functional Predictions from Interpro

Analysis	Accession	Description	Interpro Accession	Interpro Description	Amino Acid Start	Amino Acid Stop	E-value
Pfam	PF01381	Helix-turn-helix	IPR001387	Cro/C1-type helix-turn-helix domain	5	59	1.6E-16
SMART	SM00530	mbf_short4	IPR001387	Cro/C1-type helix-turn-helix domain	4	59	2.2E-17
PANTHER	PTHR46797	HTH-TYPE TRANSCRIPTIONAL REGULATOR	-	-	3	177	1.0E-31
Gene3D	G3DSA:1.10.260.40	-	IPR010982	Lambda repressor-like, DNA-binding domain superfamily	1	66	4.1E-19
SUPERFAMILY	SSF51182	RmlC-like cupins	IPR011051	RmlC-like cupin domain superfamily	67	175	5.63E-24
CDD	cd02209	cupin_XRE_C	-	-	90	176	1.18081E-24
Gene3D	G3DSA:2.60.120.10	Jelly Rolls	IPR014710	RmlC-like jelly roll fold	67	176	3.6E-19
CDD	cd00093	HTH_XRE	IPR001387	Cro/C1-type helix-turn-helix domain	4	42	3.04124E-10
SUPERFAMILY	SSF47413	lambda repressor-like DNA-binding domains	IPR010982	Lambda repressor-like, DNA-binding domain superfamily	3	66	2.95E-18
Pfam	PF07883	Cupin domain	IPR013096	Cupin 2, conserved barrel	118	174	1.4E-13

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.