Pseudomonas aeruginosa PAO1, PA0254 (hudA)
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Ontology
| Ontology | Accession | Term | GO Evidence | Evidence Ontology (ECO) Code | Reference | Comments |
|---|---|---|---|---|---|---|
| Molecular Function | GO:0016831 | carboxy-lyase activity |
Inferred from Sequence Model
Term mapped from: InterPro:TIGR00148
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
Functional Classifications Manually Assigned by PseudoCAP
|
Pathways
| Database | Xref | Pathway | Version | Evidence | PMID |
|---|---|---|---|---|---|
| KEGG | pae01100 | Metabolic pathways | 81.0+/01-23, Jan 17 |
ECO:0000249
sequence similarity evidence used in automatic assertion |
|
| KEGG | pae00130 | Ubiquinone and other terpenoid-quinone biosynthesis | 81.0+/01-23, Jan 17 |
ECO:0000249
sequence similarity evidence used in automatic assertion |
|
| MetaCyc | ubiquinol-9 biosynthesis (prokaryotic) | InterPro 5.36-75.0 |
ECO:0000259
match to InterPro signature evidence used in automatic assertion |
||
| MetaCyc | ubiquinol-8 biosynthesis (prokaryotic) | InterPro 5.36-75.0 |
ECO:0000259
match to InterPro signature evidence used in automatic assertion |
||
| KEGG | pae01110 | Biosynthesis of secondary metabolites | 81.0+/01-23, Jan 17 |
ECO:0000249
sequence similarity evidence used in automatic assertion |
|
| MetaCyc | ubiquinol-7 biosynthesis (prokaryotic) | InterPro 5.36-75.0 |
ECO:0000259
match to InterPro signature evidence used in automatic assertion |
||
| MetaCyc | ubiquinol-10 biosynthesis (prokaryotic) | InterPro 5.36-75.0 |
ECO:0000259
match to InterPro signature evidence used in automatic assertion |
||
| MetaCyc | plastoquinol-9 biosynthesis II | InterPro 5.36-75.0 |
ECO:0000259
match to InterPro signature evidence used in automatic assertion |
Functional Predictions from Interpro
| Analysis | Accession | Description | Interpro Accession | Interpro Description | Amino Acid Start | Amino Acid Stop | E-value |
|---|---|---|---|---|---|---|---|
| Hamap | MF_01983 | UbiD-like decarboxylase. | IPR032903 | Ferulic acid decarboxylase-like | 4 | 493 | 51.393753 |
| NCBIfam | TIGR00148 | JCVI: UbiD family decarboxylase | IPR002830 | UbiD decarboxylyase family | 8 | 455 | 3.6E-89 |
| Gene3D | G3DSA:1.20.5.4570 | - | - | - | 458 | 496 | 1.2E-19 |
| PANTHER | PTHR30108 | 3-OCTAPRENYL-4-HYDROXYBENZOATE CARBOXY-LYASE-RELATED | IPR002830 | UbiD decarboxylyase family | 5 | 494 | 0.0 |
| SUPERFAMILY | SSF143968 | UbiD C-terminal domain-like | - | - | 317 | 493 | 1.57E-31 |
| SUPERFAMILY | SSF50475 | FMN-binding split barrel | - | - | 7 | 314 | 5.1E-87 |
| Gene3D | G3DSA:3.40.1670.10 | - | - | - | 329 | 457 | 1.4E-41 |
| Pfam | PF01977 | 3-octaprenyl-4-hydroxybenzoate carboxy-lyase | IPR002830 | UbiD decarboxylyase family | 13 | 429 | 1.2E-113 |
Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.