Pseudomonas aeruginosa PAO1, PA0293 (aguB)
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Upstream Motifs
*Up to 500bp upstream
| Name | Start | Stop | Strand | Evidence | PMID | |
|---|---|---|---|---|---|---|
| transcriptional initiation site (+1) | 330970 | 330970 | - |
|
Details | |
| -10 region | 330977 | 330983 | - |
|
Details | |
| AguR binding site | 330984 | 330999 | - |
|
Details | |
| -35 region | 331001 | 331006 | - |
|
Details | |
| transcription initiation site | 330970 | 330970 | - |
|
11673419 | Details |
| -10 element (sigma 70) | 330977 | 330983 | - |
|
11673419 | Details |
| -35 element (sigma 70) | 331001 | 331006 | - |
|
11673419 | Details |
| AguR binding site | 330984 | 330999 | - |
|
11673419 | Details |
| Inverted repeat: CGGATTTATATCCGAT-N56-ATCGGATATAAATCCG | 330974 | 331061 | + |
ECO:0000246
computational combinatorial evidence used in automatic assertion |
10827456 | Details |
| Inverted repeat: GGCCTGGCCGA-N35-TCGGCCAGGCC | 331283 | 331339 | + |
ECO:0000246
computational combinatorial evidence used in automatic assertion |
10827456 | Details |
| Inverted repeat: CATGCTGGCG-N75-CGCCAGCATG | 331303 | 331397 | + |
ECO:0000246
computational combinatorial evidence used in automatic assertion |
10827456 | Details |
Motifs annotated in this feature
| Name | Start | Stop | Strand | Evidence | PMID | |
|---|---|---|---|---|---|---|
| Inverted repeat: GCATGGCCTTGCT-N89-AGCAAGGCCATGC | 330264 | 330378 | + |
ECO:0000246
computational combinatorial evidence used in automatic assertion |
10827456 | Details |