Strain |
Pseudomonas aeruginosa PAO1 (Stover et al., 2000)
GCF_000006765.1|latest |
Locus Tag |
PA0295
|
Name |
|
Replicon | chromosome |
Genomic location | 331762 - 332823 (- strand) |
Transposon Mutants | 4 transposon mutants in PAO1 |
Comment | Structural similarity to 1A99 (putrescine-binding protein from Escherichia coli, root-mean-square deviation: 0.6 angstroms). Sequence similarity to 1A99 (99%/37,54%) (PUT). Final predicted ligand: putrescine (PMID: 31631799) |
RefSeq | NP_248986.1 |
GI | 15595492 |
Affymetrix | PA0295_at |
Entrez | 880681 |
GenBank | AAG03684.1 |
INSDC | AAG03684.1 |
NCBI Locus Tag | PA0295 |
protein_id(GenBank) | gb|AAG03684.1|AE004467_6|gnl|PseudoCAP|PA0295 |
TIGR | NTL03PA00296 |
UniParc | UPI00000C4FEA |
UniProtKB Acc | Q9I6J6 |
UniProtKB ID | Q9I6J6_PSEAE |
UniRef100 | UniRef100_A0A0A8RBP2 |
UniRef50 | UniRef50_A4XP47 |
UniRef90 | UniRef90_W0YNY5 |
Feature Type | CDS |
Coding Frame | 1 |
Product Name |
probable periplasmic polyamine binding protein
|
Synonyms | |
Evidence for Translation |
Identified using nanoflow high-pressure liquid chromatography (HPLC) in conjunction with microelectrospray ionization on LTQ XL mass spectrometer (PMID:24291602).
Detected by MALDI-TOF/TOF (PMID:19333994).
|
Charge (pH 7) | -5.13 |
Kyte-Doolittle Hydrophobicity Value | -0.214 |
Molecular Weight (kDa) | 39.0 |
Isoelectric Point (pI) | 5.88 |
Individual Mappings | |
Additional evidence for subcellular localization |
Results |
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 306 genera
|
Pseudomonas Ortholog Database | View orthologs at Pseudomonas Ortholog Database |
Pseudomonas Ortholog Group |
POG000292 (324 members) |
Putative Inparalogs | None Found |
STRING database | Search for predicted protein-protein interactions using:
Search term: PA0295
Search term: probable periplasmic polyamine binding protein
|
A 718-kb DNA sequence of the Escherichia coli K-12 genome corresponding to the 12.7-28.0 min region on the linkage map.
Oshima T, Aiba H, Baba T, Fujita K, Hayashi K, Honjo A, Ikemoto K, Inada T, Itoh T, Kajihara M, Kanai K, Kashimoto K, Kimura S, Kitagawa M, Makino K, Masuda S, Miki T, Mizobuchi K, Mori H, Motomura K, Nakamura Y, Nashimoto H, Nishio Y, Saito N, Horiuchi T
DNA Res 1996 Jun 30;3(3):137-55
PubMed ID: 8905232
|
Analysis of the periplasmic proteome of Pseudomonas aeruginosa, a metabolically versatile opportunistic pathogen.
Imperi F, Ciccosanti F, Perdomo AB, Tiburzi F, Mancone C, Alonzi T, Ascenzi P, Piacentini M, Visca P, Fimia GM
Proteomics 2009 Apr;9(7):1901-15
PubMed ID: 19333994
|
Uncovering the structure and function of Pseudomonas aeruginosa periplasmic proteins by an in silico approach.
Caprari S, Brandi V, Pasquadibisceglie A, Polticelli F
J Biomol Struct Dyn 2020 Sep;38(15):4508-4520
PubMed ID: 31631799
|