Pseudomonas aeruginosa PAO1, PA0323

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse PseudoCyc / Metabolic Pathways

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Molecular Function GO:0019808 polyamine binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PIRSF019574
ECO:0000259
match to InterPro signature evidence used in automatic assertion
Cellular Component GO:0042597 periplasmic space
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PIRSF019574
ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0015846 polyamine transport
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PIRSF019574
ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Transport of small molecules Other PAO1 genes in this class

Pathways

Database Xref Pathway Version Evidence PMID
KEGG pae02010 ABC transporters 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Pfam PF13416 Bacterial extracellular solute-binding protein IPR006059 Bacterial extracellular solute-binding protein 40 300 4.7E-28
PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature IPR001188 Spermidine/putrescine-binding periplasmic protein 248 267 1.6E-46
PIRSF PIRSF019574 Periplasmic_polyamine_BP IPR001188 Spermidine/putrescine-binding periplasmic protein 5 347 4.7E-109
PANTHER PTHR30222 SPERMIDINE/PUTRESCINE-BINDING PERIPLASMIC PROTEIN - - 18 345 3.4E-77
Gene3D G3DSA:3.40.190.10 - - - 27 315 1.4E-101
PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature IPR001188 Spermidine/putrescine-binding periplasmic protein 73 87 1.6E-46
PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature IPR001188 Spermidine/putrescine-binding periplasmic protein 167 186 1.6E-46
CDD cd13664 PBP2_PotD_PotF_like_3 - - 26 342 0.0
PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature IPR001188 Spermidine/putrescine-binding periplasmic protein 204 223 1.6E-46
PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature IPR001188 Spermidine/putrescine-binding periplasmic protein 293 319 1.6E-46
PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature IPR001188 Spermidine/putrescine-binding periplasmic protein 46 67 1.6E-46
SUPERFAMILY SSF53850 Periplasmic binding protein-like II - - 24 346 1.18E-82
PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature IPR001188 Spermidine/putrescine-binding periplasmic protein 89 102 1.6E-46
Coils Coil Coil - - 182 202 -
PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature IPR001188 Spermidine/putrescine-binding periplasmic protein 120 136 1.6E-46
Gene3D G3DSA:3.40.190.10 - - - 129 344 1.4E-101
PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature IPR001188 Spermidine/putrescine-binding periplasmic protein 30 46 1.6E-46

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.