Strain |
Pseudomonas aeruginosa PAO1 (Stover et al., 2000)
GCF_000006765.1|latest |
Locus Tag |
PA0459
|
Name |
Synonym: clpC |
Replicon | chromosome |
Genomic location | 518083 - 520635 (+ strand) |
Transposon Mutants | 2 transposon mutants in PAO1 |
Transposon Mutants in orthologs | 3 transposon mutants in orthologs |
Comment | Translation confirmed using nanoflow high-pressure liquid chromatography (HPLC) in conjunction with microelectrospray ionization on LTQ XL mass spectrometer. Coordinates verified using RT-PCR (PMID:24291602). |
RefSeq | NP_249150.1 |
GI | 15595656 |
Affymetrix | PA0459_at |
Entrez | 881659 |
GenBank | AAG03848.1 |
NCBI Locus Tag | PA0459 |
protein_id(GenBank) | gb|AAG03848.1|AE004483_6|gnl|PseudoCAP|PA0459 |
TIGR | NTL03PA00460 |
UniProtKB Acc | Q9I659 |
UniProtKB ID | Q9I659_PSEAE |
Feature Type | CDS |
Coding Frame | 1 |
Product Name |
probable ClpA/B protease ATP binding subunit
|
Synonyms | |
Evidence for Translation |
Identified using nanoflow high-pressure liquid chromatography (HPLC) in conjunction with microelectrospray ionization on LTQ XL mass spectrometer (PMID:24291602).
|
Charge (pH 7) | -2.30 |
Kyte-Doolittle Hydrophobicity Value | -0.415 |
Molecular Weight (kDa) | 94.1 |
Isoelectric Point (pI) | 6.71 |
Individual Mappings | |
Additional evidence for subcellular localization |
Results |
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 599 genera
|
Pseudomonas Ortholog Database | View orthologs at Pseudomonas Ortholog Database |
Pseudomonas Ortholog Group |
POG000451 (857 members) |
Putative Inparalogs | None Found |
STRING database | Search for predicted protein-protein interactions using:
Search term: PA0459
Search term: probable ClpA/B protease ATP binding subunit
|
Ensembl
110, assembly
GRCh38.p14
|
caseinolytic mitochondrial matrix peptidase chaperone subunit B [Source:HGNC Symbol;Acc:HGNC:30664]
E-value:
6.1e-50
Percent Identity:
36.3
|
Ensembl
110, assembly
GRCh38.p14
|
caseinolytic mitochondrial matrix peptidase chaperone subunit B [Source:HGNC Symbol;Acc:HGNC:30664]
E-value:
6.1e-50
Percent Identity:
36.3
|
Ensembl
110, assembly
GRCh38.p14
|
caseinolytic mitochondrial matrix peptidase chaperone subunit B [Source:HGNC Symbol;Acc:HGNC:30664]
E-value:
6.1e-50
Percent Identity:
36.3
|
Stress induction of clpC in Bacillus subtilis and its involvement in stress tolerance.
Krüger E, Völker U, Hecker M
J Bacteriol 1994 Jun;176(11):3360-7
PubMed ID: 8195092
|
LTQ-XL mass spectrometry proteome analysis expands the Pseudomonas aeruginosa AmpR regulon to include cyclic di-GMP phosphodiesterases and phosphoproteins, and identifies novel open reading frames.
Kumari H, Murugapiran SK, Balasubramanian D, Schneper L, Merighi M, Sarracino D, Lory S, Mathee K
J Proteomics 2014 Jan 16;96:328-342
PubMed ID: 24291602
|