Pseudomonas aeruginosa PAO1, PA0513 (nirG)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse PseudoCyc / Metabolic Pathways

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Biological Process GO:0006783 heme biosynthetic process
IMP
Inferred from Mutant Phenotype
ECO:0000016
loss-of-function mutant phenotype evidence
8982003 Reviewed by curator
Biological Process GO:0009108 obsolete coenzyme biosynthetic process
IMP
Inferred from Mutant Phenotype
ECO:0000315
mutant phenotype evidence used in manual assertion
8982003 Reviewed by curator

Functional Classifications Manually Assigned by PseudoCAP

Energy metabolism Other PAO1 genes in this class
Biosynthesis of cofactors, prosthetic groups and carriers Other PAO1 genes in this class
Transcriptional regulators Other PAO1 genes in this class

Pathways

Database Xref Pathway Version Evidence PMID
PseudoCAP Denitrification ECO:0000037
not_recorded
PseudoCAP Biosynthesis of heme d1 ECO:0000037
not_recorded

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
FunFam G3DSA:1.10.10.10:FF:000798 Protein nirG - - 2 54 5.7E-35
Gene3D G3DSA:1.10.10.10 - IPR036388 Winged helix-like DNA-binding domain superfamily 2 54 1.6E-6
Pfam PF17805 AsnC-like ligand binding domain IPR040523 Siroheme decarboxylase , AsnC-like ligand binding domain 67 138 1.2E-14
PANTHER PTHR43413 TRANSCRIPTIONAL REGULATOR, ASNC FAMILY - - 1 124 3.7E-23
Gene3D G3DSA:3.30.70.3460 - - - 65 145 1.9E-17
FunFam G3DSA:3.30.70.3460:FF:000001 Heme d1 biosynthesis protein NirG - - 65 146 6.9E-42

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.