Pseudomonas aeruginosa PAO1, PA0563

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse View in GBrowse PseudoCyc / Metabolic Pathways

Upstream Motifs

*Up to 500bp upstream
Name Start Stop Strand Evidence PMID
Inverted repeat: GCCTGCTGGGC-N72-GCCCAGCAGGC 620910 621003 + ECO:0000246
computational combinatorial evidence used in automatic assertion
10827456 Details
Shine-Dalgarno sequence 620495 620499 - ECO:0000256
match to sequence model evidence used in automatic assertion
Details

Motifs annotated in this feature

Name Start Stop Strand Evidence PMID
Inverted repeat: GATGTTCACC-N2-GGTGAACATC 620393 620414 + ECO:0000246
computational combinatorial evidence used in automatic assertion
10827456 Details

Downstream motifs

*Up to 500bp downstream
Name Start Stop Strand Evidence PMID
Inverted repeat: CGCCGGGCCG-N2-CGGCCCGGCG 620105 620126 + ECO:0000246
computational combinatorial evidence used in automatic assertion
10827456 Details
Rho-independent transcription terminator TERM 131 620105 620126 - ECO:0000246
computational combinatorial evidence used in automatic assertion
17313685 Details
Shine-Dalgarno sequence 620013 620016 - ECO:0000256
match to sequence model evidence used in automatic assertion
Details