Pseudomonas aeruginosa PAO1, PA0750 (ung)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse PseudoCyc / Metabolic Pathways

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Biological Process GO:0006284 base-excision repair
ISM
Inferred from Sequence Model
Term mapped from: InterPro:cd10027
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0006281 DNA repair
ISM
Inferred from Sequence Model
Term mapped from: InterPro:cd10027
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0004844 uracil DNA N-glycosylase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:cd10027
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

DNA replication, recombination, modification and repair Other PAO1 genes in this class

Pathways

Database Xref Pathway Version Evidence PMID
KEGG pae03410 Base excision repair 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Hamap MF_00148 Uracil-DNA glycosylase [ung]. IPR002043 Uracil-DNA glycosylase family 1 11 227 41.459858
NCBIfam TIGR00628 JCVI: uracil-DNA glycosylase IPR002043 Uracil-DNA glycosylase family 1 12 220 1.6E-83
PANTHER PTHR11264 URACIL-DNA GLYCOSYLASE IPR002043 Uracil-DNA glycosylase family 1 7 229 7.3E-111
Gene3D G3DSA:3.40.470.10 - IPR036895 Uracil-DNA glycosylase-like domain superfamily 2 231 3.4E-104
Pfam PF03167 Uracil DNA glycosylase superfamily IPR005122 Uracil-DNA glycosylase-like 60 215 6.1E-25
SMART SM00987 UDG_2_a - - 56 216 1.2E-38
SUPERFAMILY SSF52141 Uracil-DNA glycosylase-like IPR036895 Uracil-DNA glycosylase-like domain superfamily 9 228 1.09E-95
FunFam G3DSA:3.40.470.10:FF:000001 Uracil-DNA glycosylase - - 4 229 7.6E-105
SMART SM00986 UDG_2 IPR005122 Uracil-DNA glycosylase-like 56 216 1.2E-38
CDD cd10027 UDG-F1-like IPR002043 Uracil-DNA glycosylase family 1 26 226 0.0

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.