Pseudomonas aeruginosa PAO1, PA0847
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Motifs annotated in this feature
| Name | Start | Stop | Strand | Evidence | PMID | |
|---|---|---|---|---|---|---|
| ahpB promoter | 927087 | 927087 | + |
|
Details | |
| OxyR-binding site upstream of ahpB | 927016 | 927058 | + |
|
Details | |
| OxyR binding site | 927016 | 927052 | + |
|
10913087 | Details |
| OxyR binding site | 927016 | 927052 | + |
ECO:0000314
direct assay evidence used in manual assertion |
19506074 | Details |
| OxyR binding site | 927016 | 927030 | + |
ECO:0000314
direct assay evidence used in manual assertion |
19648236 | Details |
| Inverted repeat: TCGGCATCGC-N20-GCGATGCCGA | 925092 | 925131 | + |
ECO:0000246
computational combinatorial evidence used in automatic assertion |
10827456 | Details |
| Inverted repeat: GCCGAAGTCG-N28-CGACTTCGGC | 925946 | 925993 | + |
ECO:0000246
computational combinatorial evidence used in automatic assertion |
10827456 | Details |
Downstream motifs
*Up to 500bp downstream
| Name | Start | Stop | Strand | Evidence | PMID | |
|---|---|---|---|---|---|---|
| Shine-Dalgarno sequence | 924934 | 924937 | - |
ECO:0000256
match to sequence model evidence used in automatic assertion |
Details |