Pseudomonas aeruginosa PAO1, PA0856

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse PseudoCyc / Metabolic Pathways

Upstream Motifs

*Up to 500bp upstream
Name Start Stop Strand Evidence PMID
LasR binding site 935326 935341 -
Details
AlgU binding site 935410 935445 +
Details
AlgU binding site 935410 935445 +
11807066 Details
LasR binding site 935326 935341 - ECO:0000314
direct assay evidence used in manual assertion
19682264 Details
Shine-Dalgarno sequence 935269 935271 - ECO:0000256
match to sequence model evidence used in automatic assertion
Details

Motifs annotated in this feature

Name Start Stop Strand Evidence PMID
transcriptional initiation site (+1) 935445 935445 +
Details
AlgU binding site 935410 935445 +
Details
AlgU binding site 935410 935445 +
11807066 Details

Downstream motifs

*Up to 500bp downstream
Name Start Stop Strand Evidence PMID
Rho-independent transcription terminator TERM 223 936389 936405 + ECO:0000246
computational combinatorial evidence used in automatic assertion
17313685 Details