Pseudomonas aeruginosa PAO1, PA0879

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse PseudoCyc / Metabolic Pathways

Gene Feature Overview

Strain Pseudomonas aeruginosa PAO1 (Stover et al., 2000)
GCF_000006765.1|latest
Locus Tag
PA0879
Name
Replicon chromosome
Genomic location 961370 - 962530 (+ strand)
Transposon Mutants 3 transposon mutants in PAO1
Transposon Mutants in orthologs 1 transposon mutants in orthologs

Cross-References

RefSeq NP_249570.1
GI 15596076
Affymetrix PA0879_at
Entrez 879721
GenBank AAG04268.1
INSDC AAG04268.1
NCBI Locus Tag PA0879
protein_id(GenBank) gb|AAG04268.1|AE004522_10|gnl|PseudoCAP|PA0879
TIGR NTL03PA00880
UniParc UPI00000C51A1
UniProtKB Acc Q9I566
UniProtKB ID Q9I566_PSEAE
UniRef100 UniRef100_A0A072ZLH3
UniRef50 UniRef50_A9ILQ6
UniRef90 UniRef90_C3KCI1

Product

Feature Type CDS
Coding Frame 1
Product Name
probable acyl-CoA dehydrogenase
Product Name Confidence: Class 3
Synonyms
Evidence for Translation
Identified using nanoflow high-pressure liquid chromatography (HPLC) in conjunction with microelectrospray ionization on LTQ XL mass spectrometer (PMID:24291602).
Charge (pH 7) -6.48
Kyte-Doolittle Hydrophobicity Value -0.227
Molecular Weight (kDa) 42.8
Isoelectric Point (pI) 5.51

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 463 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000846 (417 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PA0879

Human Homologs

Ensembl 110, assembly GRCh38.p14
isovaleryl-CoA dehydrogenase [Source:HGNC Symbol;Acc:HGNC:6186]
E-value: 1.8e-41
Percent Identity: 30.8
Ensembl 110, assembly GRCh38.p14
isovaleryl-CoA dehydrogenase [Source:HGNC Symbol;Acc:HGNC:6186]
E-value: 1.8e-41
Percent Identity: 30.8

References

No references are associated with this feature.